Another update:

I found and commented out the code listed below in the jquery.php file. This has made the form buttons appear. Probably not the best solution, but I will leave this as is until I hear of a better way to fix this Any suggestions? Also still would like to know how to use the Read More magenta buttons. Thanks!

//style all submit buttons
jQuery(‘form:not(.searchform) input[type=”submit”]:not(.Cart66UpdateTotalButton), a.Cart66CartContinueShopping, #Cart66CheckoutButton, .Cart66ButtonSecondary:not(.Cart66UpdateTotalButton), a#Cart66WidgetViewCart, a#Cart66WidgetCheckout’).each(function() {